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National Symposium
ON

Advances in Biochemistry: A Portal for Multi-tasking Opportunities

Organized by

Prof. S. C. Roy Birth Centenary Celebration Committee
Department of Biochemistry, University of Calcutta.
November 17, 2004

Foreword- Dr. K. Chakraborti Head Department of Biochemistry
Editorial - A.B.Banerjee
Professor Sailesh Chandra Roy -Professor J.J. Ghosh
To Prof. S. C. Roy – A Homage - Prof. T. M. DAS
My reminiscence of Professor S.C.Roy -
Prof. Manju Mukherjee
Inaugural Programme
Scientific Programme
Professor S.C.Roy Birth Centenary Celebration Committee
Abstract of Papers


FOREWORD

It is a proud privilege for me to announce the commencement of the Prof. S.C. Roy Centenary Celebration. We at the department of Biochemistry take this opportunity to offer our respect to the memory of Professor Sailesh Chandra Roy and his contribution to the development and nurturing of the department in its formative years. The Department of Biochemistry has been fortunate to have an illustrious personality like Professor S.C. Roy since its very inception first as a teacher and subsequently as the head of the
department from 1962-1969. It is the spirit and vision of great teachers such as Prof. Roy that has brought this department to its present standing in the national and international fields. Prof. Roy was not only an academician and teacher but also a person
possessing high moral values that he inculcated in his students and all who came in contact with him. It required great determination and vision to nurture a fledgling subject and help in bringing it to a splendid maturity. Prof. Roy possessed both these attributes and in addition a very pleasant personality, which could endear him almost instantly to even the most casual acquaintance. At a personal level I remember the awe with which I first approached him, as a junior student, to pay him my respect. I had heard
about his knowledge and great commitment and sacrifice for the national cause. In an instant he had put his arm on my shoulder and smiling benignly he made me feel the warmth of his affectionate welcome. Teaching and research have always been intrinsically linked at the Department of Biochemistry. The great pioneers of the likes of Prof. B.C. Guha and Prof. S.C. Roy laid the foundations of the curriculum and research areas of Biochemistry and their illustrious and worthy students took up the challenge in the years that came. All through these years, the department has been guided by the need to constantly update and reorient its curriculum
and venture boldly into the emerging areas of research. In doing so the department has diversified its thrust areas both in teaching and research so as to offer its students and research workers the competitive edge in the national and international fields.
Today the department in addition to its core biochemistry curricula has developed teaching and research expertise in the areas of Nutritional Biochemistry, Neurobiochemistry, Microbiology, Molecular Biology, Reproductive Biology, Clinical Biochemistry, Immunology, Plant Biochemistry, Biocomputation and Environmental Biology. These subjects form major thrust areas in research throughout the world. The objective of this department is to equip its students and researchers with the myriad tools and ideas of
biochemistry that would help them to integrate and coordinate the constantly emerging opportunities of modern day biological science. Presently this department is acting as a coordinating agent for three relatively new departments (1) Prof.B.C.Guha Centre for Genetic Engineering and Biotechnology (2) Microbiology and (3) Environmental Science. In recognition of its contribution in the development of quality research and teaching the department has received grants in the form of financial assistance from UGC
(COSIST, 1985), DSA Phase I, II and III (1990,1996,2002) and DST (FIST 2003). These grants have been utilized to develop infrastructure and laboratory facilities in this department and these facilities have been extended to a number of Institutes and Universities of this state. The founding fathers of this department, driven by their scholastic and nationalistic zeal were constantly aware of the need for self-reliance and the need to spread the benefits of research and teaching far and wide. Today this
department feels proud of its achievements and its success in placing students in eminent positions in a variety of fields not only in research and academics but also in industry and as entrepreneurs. True to its spirit the department encourages academic exchanges between teachers, students and scholars of various institutions both nationally and internationally through summer school training, seminars, educational tours and invited lectures by visiting faculty members.
This symposium entitled "Advances in Biochemistry: A Portal for Multi-tasking opportunities" is intended to present the viewpoints of eminent scientists from diverse disciplines which we are confident would encourage us to utilize biochemistry successfully in newer and unexplored areas of science. I thank Prof. Asis Kr. Banerjee, honourable Vice-Chancellor, University of
Calcutta (the Chairman of DSA Phase III programme and the president of the present function), Professor Siddhartha Roy (Director, IICB, Kolkata, the Guest of Honor) and all the distinguished personalities who have honored us with their presence. I offer sincere thanks to all my colleagues, scholars, non-teaching staff and students for their interest and active participation in
this programme. Our alumni both in India and abroad who have supported us and offered us valuable suggestions deserve my heartfelt thanks. Owing to certain constraints it was not possible to reach each one of our well- wishers, I regret this failing.
I earnestly hope that this symposium serves the purpose of constructive and imaginative scientific interaction leading to newer avenues for applications of biochemistry. This ultimately would be the most fitting tribute to the memory of Prof.S.C.Roy.
Dated: November 17, 2004. Dr. K. Chakraborti
Head, Department of Biochemistry University of Calcutta.


EDITORIAL

When I joined this Department in 1958 as a student of M.Sc. class, I should concede now that I was very much confused. I knew this department was founded by a world renowned biochemist who was also officially the Head of the Department, but I was informed that he was away and engaged as a high level administrator in Damoder Valley Corporation (what a job for a biochemist to run a hydroelectric project!). The second in the Department in its administrative line was Dr. S.C.Roy. Again I was informed that he was an
armed revolutionary so much so that colonial rulers had to lodge him in high security prisons at Hijli and Buxa during our struggle for independence for more than ten years. As our regular Head of the Department was absent, we the new entrants had no choice but to tip toe over the swing door of the sitting room of the ‘Acting Head’. To our utter surprise instead of a dreaded ‘terrorist’ we found a calm and quite gentleman clad in all whites and wearing a kind of smile on his face which we could expect only from our parents.
From that very day we understood that within his frail body he carried a very big heart where we, his students could easily dig in. In fact his students and associates all were the part of his personal life. After the sudden death of Prof. B.C. Guha in 1962, Prof.
S.C. Roy took over the charge of orphaned Department and cared for it till his retirement in 1969. During his tenure he shaped the Department as we see it now. The student intake increased from 8 to 60, the faculty and supporting staff strength increased more than three folds. The Department was shifted from the Applied Chemistry building to its own house. By his tireless effort and tactful approach he could secure a large fund from the UGC and equip the Department with modern tools and made it a leading center in the country for biochemistry teaching and research. Prof. Roy participated in the armed revolutionary movement for emancipation of our motherland from the British rule when he was just a school boy. He did his M. Sc. in Physical Chemistry from Dhaka
University and joined Prof. Guha’s Laboratoy as research scholar preferring biochemistry as his future field of study. His educational career was intercepted many times as he had to spend a large part of his youthful days behind the bar in maximum security prisons (which were equivalent to ill famed concentration camps) of the British rulers. For his doctoral thesis he worked on Ascorbigen and different other problems related to Ascorbic acid metabolism. After obtaining his D.Sc. degree from this University he joined with Prof. Albert Szent Gyorgei in his laboratory at Woods Hole of Bethesda, USA. While working at this place he came in contact with several Nobel Laureates (apart from Szent Gyorgei) like Meyerhof, Warburg, Neuberg and Lowie. He also worked in the Laboratory of Barron at the Medical School Centre, Chicago, for physico – chemical charaoterizatrein of muscle proteins and learned the techniques used in biochemical analysis, which were very ‘modern’ at that time including the use of radioactive tracer compounds.
After returning from USA he joined as a teacher in this Department. It may be mentioned here that he was first to use radioactive tracer technique in biochemical study in India. As a member of the Faculty of this Department he developed his own Laboratory and research groups. His research interests were widely divergent, which covered biosynthesis of vitamins B2 and B12 in
Microorganisms, protein synthesis in plant mitochondria, use of unconventional plant seeds as sources of fatty acids and lipids, human essential hypertension and biochemical studies on human uterine cancer tissues. About fifty students come out with Ph.D. and D.Sc. degrees from his laboratory. Many of his students became leading international figure in the subject. His most loved research field was probably the cancer cells. His dating with cancer came to end with his death, after brief illness, due to lung
cancer on Independence Day of 1989. As a matter of coincidence we are celebrating the birth centenary of our two great teachers, Prof. Guha who created this Department and Prof. Roy who nurtured it earnestly to make it grow strong. In the centenary year we realize how strong is the foundation of this Department. The strong foundation assures firm growth. The students were part and parcel of Prof. Roy’s life. He used to cover them his tender love, protect them from all adversaries and enthuse them at the time of despair. He was a constant source of inspiration for all of them. In this occasion, we remember our revered teacher, Prof.
Sailesh Chandra Roy, who was a great visionary. He had very high dreams for his students and for his Department. Now it is our turn to follow his life and teaching to make his dreams real.
A.B.Banerjee.

 
PROFESSOR SAILESH CHANDRA ROY: FROM A DEDICATED FIGHTER IN SWADESHI MOVEMENT TO A DEVOTED PILGRIM TO THE TEMPLE OF SCIENCE By Professor J.J. Ghosh


Professor Sailesh Chandra Roy belonged to those very few Indians who were acknowledged and admired in both academic world and
the political world, connected to the nationalist movement in the pre - independence period in India. One striking feature of Professor
Roy’s personality was the unbridgeable gap he used to maintain between these two worlds in his daily life. ‘LOCO PARENTIS‘ FIGURE IN THE APPLIED BIOCHEMISTRY LABORATORY To-day while paying my homage to Professor Sailesh Chandra Roy (more familiar to all of us as Sai1eshda), my mind goes back to nearly sixty years back, in the mid - 1940' s, when we first entered the Department of Applied Chemistry as a student, in the M. Sc. Applied Biochemistry classes of the department. Unlike the other sections in the Department (Oils and Fat section, Ceramics section), the conditions of the Applied Biochemistry was
miserable with no appointed teachers because Professor B.C. Guha, the Head of the Department as well as head of the Section, was on leave and on lien to the Ministry of Food, Govt. of India, as the Chief Technical Adviser in Food and Nutrition. On the first day of our class, when we came to know that Professor Guha will not be able to take the biochemistry class, we all became
disappointed, a few amongst us even changed their preference for other specialization. However, to the rest of the group, who remained practically stuck to the Applied Biochemistry, there was some silver lining in the dark clouds with the appearance of Dr. Sailesh Chandra Roy as our teacher, who ungrudgingly came forward to take the reins of teaching programme, just at
the request of Prof. B. C. Guha. Without caring for any official intimidation.9 from the University Office, Saileshda (by this time we were all acceptable to him as Saileshda) started taking our regular classes with unimaginable care and sympathetic, understanding, which practically made us forget the absence, of Professor Guha for the time being. Apart from under taking the
teaching responsibility, Saileshda was ever available for consultation to all the senior research workers working at that time in Prof. Guha's big laboratory room, at the ground floor of the building. To all the senior research workers like Dr. Durlav Roy; Dr. Sudhangshu Roy, Dr. Arabinda Bose, Dr. Sushil K. Bose, Dr. Paresh Pal and many others whom I do not recall individually at the moment were all receiving the suggestions and assistances, whenever needed, about their research work from Saileshda,
while Professor Guha was away at Delhi. Saileshda with his sympathetic personality and everhelping attitude was like a ‘loco parentis’ or a local guardian-like-figure in the applied biochemistry laboratory during those earlier days in the 1940’s.
AT PROFESSOR SZENT- GYÖRGYI’S LABORATORY, WOODSHOLE, N.Y., USA: MEMORABLE EXPERIENCES
Some time in 1949 - 50, Saileshda went to the Woodshole Laboratory in the USA, as a "Visiting scientist" to work with Professor Szent- Györgyi;, who had by this time immigrated from Europe and settled at Woodshole, which was
known as the biologists' paradise for its unparalleled natural beauty and bio-diversity. Woodshole was also famous for another reason - it was the Mecca for the annual meeting place of all the top biochemists like Warburg, Meyerhof, Nachmansohn, Lipmann, Ochoa and many others during every- summer in those post-war years. Obviously this was the occasion for any aspiring, younger biochemist to come closer to these "giants" in a very informal atmosphere. I still cherish preserving a copy of the group photo of
these stalwarts, which I procured from Saileshda. Equally stimulating was the laboratory environment where the research laboratory remained accessible 24 hours a day, as described by him on later occasion..10 INTEREST IN CANCER METABOLISM STUDY ORIGINATED FROM HIS BRIEF DISCUSSION WITH WARBURG AT WOODSHOLE While at the Woodshole, the most unforgettable experience in his research career was the brief discussion he had with Prof. Otto Warburg, who was at
that time most critically involved with the controversial hypothesis -‘whether the aerobic glycolysis resulting from mitochoncdial damage is the cause or effect of cancer formation’. Warburg fanatically believed that it was the cause whereas Sydney Weinhouse, Warbug's ex-student, and the whole American School believed that it was simply the effect. This controversial hypothesis
brought a commotion in the then bio-chemical world in the late 1940's. Naturally and quite expectedly, during this brief discussion, Saileshda had a glimpse of the turbulent personality of Otto Warburg, for which he was so well known to all his ex-collaborators in his laboratory! All these colorful interactions left no doubt some impression on his future research programme in the building of his research school at Calcutta University. RE-ESTABLISHMENT OF THE BIOCHEMISTRY DEPARTMENT TO THE
BALLYGUNGE SCIENCE COLLEGE CAMPUS INITIATED BY PROF. ROY. The shifting and re-establishment of the Department of Biochemistry from the Rajabazar Campus to the Ballygunge Science College Campus was done in the mid-1960’s, during Prof. Roy's time. No doubt this shifting has been vital for further expansion and development of the department, which has
taken place in the last two or three decades. All teachers and students therefore gratefully remember Professor Sailesh Chandra Roy on this occasion of his birth centenary celebration.
TO PROFESSOR S. C. ROY – A HOMAGE- Prof. T. M. DAS

Adversity often makes a man and perhaps also an institution, provided the challenge is met with courage, determination and above all indomitable spirit. This is very aptly illustrated by the life of Professor S.C. Roy and the development of the Department of Biochemistry, Calcutta University. Dr. Roy joined the laboratory of late Professor B.C. Guha after a political detention of
more than ten years. He participated in the revolutionary movement for the emancipation of our motherland from the British domination when he was quite young – just a schoolboy. From the very beginning he had been steeled and groomed well for a revolutionary life involving much hazards and hardships. His untiring zeal for revolutionary work, organizing ability and
above all his devotion and dedication to the cause of our country, very soon put him high in the hierarchy of leadership. As such he was very often entrusted with jobs, requiring exceptional ability, caution, devotion and drive. It may be stated that any of them could land him to fatal disaster. Dr. S.C. Roy was a bright M.Sc. in Physical Chemistry of Dacca University and Professor J.C. Ghosh and his younger brother Professor B.N. Ghosh introduced Roy to Dr. B.C. Guha, who was the Professor of Applied
Chemistry, Calcutta University. Dr. Roy was by discipline and training a physical chemist. He had been practically cut off from the scientific world for nearly a decade. To add to that biochemistry was entirely a new subject, if not Greek to him. He took a
revolutionary decision in preferring biochemistry for his future field of study and research. His mind was exceptionally receptive and resourceful. By dint of sheer hard work, sustained labour and steadfast pursuit he caught up with the subject in a minimum of time and was in a position to be of considerable assistance to Prof. Guha in teaching and research.. Biochemistry was then a small section under Applied Chemistry and very ill-equipped for biochemical research. Items of equipment at that time were an
ordinary centrifuge, a freeze (3-4 ºC) a Warburg manometer, a few incubators, autoclaves and an animal house not worthy of the name. These scanty resources put a great constrain on the choice of research activity. Pet problem with Prof. Guha after his return from Cambridge was ‘ascorbigen’ (supposed precursor of ascorbic acid) and a number of workers tumbled on it
in their attempt to establish its identity. Roy was given the problem of isolation, purification and if possible crystallization of the product from natural sources, such as green cabbage, etc. As there was no fellowship, Roy had to work without any financial assistance for more than two and half years. In spite of that he put his heart and soul on the problem, worked from
morning 8 a.m. till 9-10 p.m. in the night. He had to do this because cabbage was seasonal in our locality and he had to process the raw material up to a certain stage suitable for storage and future use. Time was very hard for him because he had to earn his livelihood on tuition fees from students he coached and also by contributing to some Malaysian daily and weekly,
commentary on current political affairs in India. We have information that these articles were very much appreciated by the Indian community there. Those sources were also suddenly cut off with the Japanese occupation of Singapore and Far Eastern countries during the World War II. He carried out extensive work on various aspects of ascorbic acid metabolism and the mechanism of accelerated synthesis in rats under narcotics. For this work Roy was awarded D. Sc., which is the highest degree of our University.
Afterwards, Dr. Roy was offered a fellowship to work with Prof. A. Szent-Györgyi at Woods Hole or Bethesda.
He was very warmly received at Woods Hole by Prof. Szent- Györgyi and his group, consisting mostly of his old research associates from Hungary. He remembered with fond memory the kindness, warmth and affection he. received from his Prof. (Szent- Györgyi was endearingly called so by his research associates) and his wife, a highly accomplished lady. She was
almost like a mother to the whole group. Woods Hole is one of the most picturesque places in the States and a very
pleasant summer resort. Marine Biological Laboratory (MBL) and the Institute of Oceanography stood majestically amidst sylvan setting with blue expanses of the sea playing around. The abundance of fauna and marine species attracted a host of biologists, particularly biochemists, physiologist, etc. to MBL during the summer session. The institute offered exceptional facilities
for work. Academic and research atmosphere that prevailed there at that time was unique. Seminars, symposia, lectures, group discussions, workshop training for different techniques, were amongst a few of the routine programme. Six Nobel Laureates - Meyerhof, Warburg, Neuberg, Lowie, Szent- Györgyi were amongst them. Their participation in all these activities
greatly heightened the general interest. Summer months in Woods Hole were really bonanza for biochemists and people of allied disciplines. Woods Hole gave people opportunity for coming in contact with others who were really pioneers in their respective fields. This greatly helped cross-fertilization of ideas, which is essential for development and growth of science. It was here Roy became somewhat intimate with Warburg, a teciturn type, very grave, not encouraging any personal intimacy beyond his close
circle of limited friends. Roy was a close neighbor to Warburg at Woods Hole and as such got some opportunity to come in contact with him and this soon developed into some intimacy. Roy used to call at Warburg and occasionally spend evening with him. Warburg was very much Interested to know the status of biochemistry as an independent discipline of science and teaching
and research facility in our country at the University level and so on. He was not very much in favour of instrument-based research though himself a great experimentalist and held "Idea is the last word in research and not the instrument". It is true, but we have long outlived the time of Warburg and to. depend on sophisticated instruments for our biological research, but supremacy of idea in science is still there and will remain so for the most time to come. The 'Double Helix' is a glorious example to that.
Prof. Roy and his group worked in the following areas: (1) Protein biosynthesis, (2) Biochemical studies of human uterine cancer,
(3) Biosynthesis and metabolism of some Vitamins, (4) Vitamin K and prothrombin, (5) Human essential hypertension, (6) Bacterial metabolism. In each of these fields his associates made quite significant contributions as will be evidenced from a large number of publications to their credit. About fifty of his students and research associates have been the recipients of Ph. D. & D. Sc. degree of our University. Many of his research associates are at preset holding high academic and executive positions in India and abroad.
By his tireless effort and tactful approach Dr. Roy was able to secure good funds from the University Grants Commission and equipped the department with almost all the modem tools necessary for biochemical research and teaching. Within a very short space of time the department became a leading centre in India for biochemical research and teaching, and attain considerable international reputation. The new trend for the development of interdisciplinary-studies in biological sciences under 'life science' gained much momentum in different Indian universities. More than 12 universities of India have included this new course
of study in their academic curriculum. Our University is perhaps in a position to claim that Life Science for the first time in India came into being and was given a concrete shape and formulation. We organized the Centre for study and research in our University in 1968. Prof. Roy being a biochemist of multi-disciplinary outlook and man of exceptional fore-sight and drive played the
most decisive role in bringing our Calcutta University to initiate works on multi-disciplinary problems with sowing the seeds of study and researches on ecology and environmental sciences. We first initiated the works on social. accounting of natural resources, we assessed the environmental benefit rendered by a medium size tree for 50 years is equivalent to over 15 lakhs of
rupees which was internationally acclaimed and gave rise to a new methodology for Social Accounting and Corporate Social Reporting of intrinsic value of natural resources. Indian Association of Biological Sciences was amalgamated with the Centre and continued to publish its research journal 'Indian Biologist' since the last 36 years from 1968. I have the unique opportunity of working with him in the field of environmental science and other academic fields for a long time. His personal and endearing touch has always added grace to and enlivens all our activities. I fervently hope that his unstained help and guidance would always
be with us and we would hold them as precious assets in our life. I hereby offer my sincere love and deep gratitude as homage to him in his Birth Centenary.

 
My reminiscence of Professor S.C.Roy - Prof. Manju Mukherjee

My association with Prof. S.C.Roy dates back to Sept. 1959, when I Joined the laboratory of Prof. Roy at Rajabazar Science College as an ICMR research Scholar, after leaving my post of Biochemist at S. S. K. M. Hospital, IPGMER,
Calcutta. I have many fond memories of Prof. S.C.Roy who was a friend, philosopher and guide to many of us in true sense. With his pleasing personality and inspiring leadership, he had the capacity to instill scientific curiosity and a sense of confidence in the mind of his students. Prof. Roy had varied research interest at that time; besides his favourite field of research - protein biosynthesis in plant mitochondria, other areas were: human uterine cancer, biosynthesis and metabolism of some vitamins and human essential
hypertension. Prof. Roy assigned me with the task of isolating Riboflavin from pseudomonas species – a strain ‘isolated’ in the laboratory by Dr. Subrata Ganguly. I later learnt that the project was continuing for the last 2-3 years and one ‘Khokada’ (Arabinda Guha) and Nilimadi had left for the USA after working unsuccessfully on that project. Sir was confident that I would not
leave the project abruptly since I was recently married and my husband just returned from Germany. The environment in the lab was very congenial and I don’t recall any unpleasant feeling among fellow scholars. We used to work in the 1 st floor lab of Applied Chemistry building where Amiya Banerjee, Rajsudhir Mitra, Arati, Sreelekha, Bijon Ghosh and Ranjit Dutta have been working. Dwarikda was working on a Tea-board project. Dr. N.C. Ganguly used to sit in the next room where Hirenda (H.K.Das),
Shantida, Rashbehari Guchhait also worked and so far I remember, Arun Baran Banerjee and Ananda Chakraborty have been working on their M.Sc.. project. Pradip Roy Barman, Sumitra, Jharnadi and others used to work under Prof. B.C. Guha in the groundfloor laboratory. I remember with nostalgia our tiffin time at the canteen where Amiya used to sing with his melodious voice. Prof. Roy trained many excellent students, who, in later years, have earned international recognition for their research
in Biochemistry. He took active interest in the development of all students and took pride in their accomplishments.
For my research I had to handle very large quantities of culture media and Sir had kindly assigned his nephew Jyotirmoy to help me in this work. Subrata Ganguly often came after his office at ICI to supervise the progress of my work since he was the initiator of the project. Sir was very upset when I eventually left the project in August 1960 for my doctoral study at Tuebingen University, West Germany. Though my stay at Germany was very pleasant and successful in getting the coveted Alexender von Humboldt
Fellowship, I was disappointed to learn that Biochemistry was not recognized as separate science subject in Germany even in 1962. My Ph. D. supervisor Prof. Dr. Karl Brecht wrote to Prof. S.C. Roy about the problem. Sir helped me and as per his suggestion I submitted the thesis for D.Sc. degree of Calcutta University. His kindness and help overwhelmed me, although I did
not join his lab at that time. Prof. Roy advised me to join the Dept. of Biochemistry at Ballygunge Science
College as pool officer (CSIR) in 1966 after my return from the USA. He assigned me teaching Physiology and Endocrinology to M.Sc. Biochemistry students. I am grateful to Sir that he initiated my teaching and research career at the Biochemistry dept., which I continued for the next 34 years. I remember many pleasant and fruitful moments of my long association with Prof. S.C. Roy. I was impressed by his greatness as a teacher, his affection for his students and his humane nature. Sir had good command in English
language and writing and gave me useful suggestions for writing a paper. We fondly remember the Bijoya Sammilani at his residence. Sir liked to have big lunch gathering for his research scholars and I was often invited with my children..18
He was a connoisseur of good things. I had the good luck to having very good quality of Darjeeling tea served in fine china crockery, which Sir brought from Japan. He was very music loving and enjoyed listening to long playing records of western classical music of Beethoven, Mozart that I brought from Germany. Often Prof. S.C. Roy commemoration lecture was followed by a Rabindra Sangeet session. I think it will not be out of context to mention about Prof. S.C. Roy Commemoration Committee and the lectures.
The idea of offering felicitation to Prof. S.C. Roy after his retirement was first mooted by Dr. Durlav Kr. Roy. A committee was eventually formed in July, 1980 with some faculty members of the University, Prof. Roy’s old associates here and abroad and his friends – with Prof. S.K. Mukherjee, ex Vice-Chancellor of Calcutta University as President, Prof. J. J. Ghosh and Prof.
T.M. Das as secretaries and Prof. G.C.Chatterjee and myself as treasurers. We have received liberal financial aid from many of Prof. Roy’s old students in the USA and also from here. I had the opportunity to discuss about the program (during my visit to the USA in 1981), with some of Prof. Roy’s students – like Amiya Banerjee, Umadas Maitra, Naba Gupta, Ananda Chakraborty, Subhas Basu, Salil Das and others. The overwhelming response by way of contribution was very encouraging and Amiya handed over to me a
dollar draft when I left USA in May 1981. To celebrate 76 th Birthday of Prof. Roy, 1 st commemoration function was held
in December 1981, coinciding with the Silver Jubilee celebration of the Biochemistry department. A commemoration volume containing scientific papers was published as a befitting tribute to Sir. The committee decided to institute an annual "Prof. S.C. Roy award" to an outstanding Biochemist or Life Scientist. 1 st medal for 1981 was awarded to one of Prof. Roy’s illustrious students –
Dr. Ananda Mohan Chakraborty. For the past two decades, the committee has been able to invite distinguished colleagues and students of Sir from here and abroad and listen to their contribution to their respective areas. Many of Prof. Roy’s freedom.19
fighter friends and Shri Hiren Dutta Gupta of East India Pharmaceutical Works were always present in these functions.
I must admit that we were fortunate in having Sir always with us in the initial years – editing the commemoration volume, suggesting the names of the awardees and for revival of funds. Sir suggested to include the name of Dr. D.J. Chattopadhyay as co-treasurer after the illness of Prof. G.C.Chatterjee. The meticulous care with which Prof. T.M.Das looked after the publication, communicating with the awardees and other activities of the committee promised success of the commemoration festival. Thus with the award presentation ceremony every year, we have an occasion to remember Prof. Roy and pay our respect and appreciation for his
contribution to the department as well as to the discipline of Biochemistry. Sir, who was a disciplined man, non-smoker taking morning walk everyday at dawn had to suffer from lung cancer. I think it is an irony of my fate when Sir breathed his last on August 15, 1989; I was then the Head of the Dept. of Biochemistry to which he initiated me. May his soul rest in peace.

 
INAUGURAL PROGRAMME


November 17, 2004
10:00 A.M. Registration
11:00 A.M. Invocation
11:05 A.M. Welcome Address:
Dr. K. Chakraborti, Head,
Dept. of Biochemistry, University of Calcutta
11:10 A.M. Address by Prof. D. J. Chattopadhyay, Dean,
Faculty of Science, University of Calcutta
11:15 A.M. Address by Prof. S. Roy, Director,
Indian Institute of Chemical Biology, Jadavpur
11:25 A.M. Reminiscence
11:45 A.M. Address by Prof. Asis K Banerjee
Vice Chancellor, University of Calcutta
11:55 A.M. Vote of Thanks: Prof. M. K. Poddar,
Dept. of Biochemistry, University of Calcutta
12:00 P.M. Tea Break
12:30 P.M. Scientific Programme.


SCIENTIFIC PROGRAMME

12:30 – 1:15 P.M. CHAIRPERSON: Prof. B. B. Biswas
Former-Director, Bose Institute, Kolkata
Speaker: Prof. T. Ramasarma
INSA Honorary Scientist, Solid State & Structural Chemistry
Unit and Department of Biochemistry
Indian Institute of Science, Bangalore.
Coenzyme Q, a vitamin?
1:15 – 2:00 P.M. Lunch
2:00 – 2:35 P.M. CHAIRPERSON: Prof. Sudhamoy Ghosh
Former-Prof., BREF-BIOTEK, IIT-Kharagpur
Speaker: Dr. H. S. Sen
Director
Central Research Institute for Jute & Allied Fibres
Kolkata, West Bengal.
New Frontiers of research in jute and allied fibres
2:35 – 3:10 P.M. Speaker: Dr. Raman K Roy
AstraZeneca India Pvt. Ltd., Bangalore, India
TB: The unmet Medical need & a fresh perspective for
the Drug Discovery Path.
3:10 - 3:30 P.M. Tea Break
3:30 – 4:05 P.M. CHAIRPERSON: Prof. J. J. Ghosh
Former-Head, Dept. of Biochemistry,
University of Calcutta
Speaker: Dr. Nishit K Mukhopadhyay
Department of Surgery, Brigham and Women’s Hospital,
Harvard Medical School, USA.
Unraveling Androgen Receptor Interactions by
Proteomic Approach
4:05 – 4:40 P.M. Speaker: Dr. Ranjan Sen
Laboratory of Transcription Biology Center for DNA
fingerprinting and Diagnostics, Hyderabad.
Mechanism of transcription termination and
antitermination in E.coli.
4:40 – 5:15 P.M. Speaker: Dr. Tamal Raha
Howard Hughes Medical Institute
University of Massachusetts
Medical School, Worcester, Massachusetts, USA

 
PROFESSOR S.C.ROY BIRTH CENTENARY CELEBRATION COMMITTEE

Patron
Prof. Asish K. Banerjee
Vice Chancellor, University of Calcutta
Advisory Members
Dr. S. K. Basu. New Delhi
Prof. A Datta. New Delhi
Prof.(Mrs) K Datta, New Delhi
Prof. Sudhamoy Ghosh, Kolkata
Dr. Dolly Ghosh, Kolkata
Prof. S.C.Pakrashi, Kolkata
Prof. T.M.Das, Kolkata
Prof. N.C.Ganguly, Delhi
Prof. H.K.Das, Delhi
Dr. Pabitra Maitra, Kolkata
DR. Amit Sen, Kolkata
Prof. Malaya Gupta, Kolkata
Prof. J.J.Ghosh, Kolkata
Prof. S.K.Bose, Kolkata
Prof. G.C.Chatterjee, Kolkata
Prof. I.B.Chatterjee, Kolkata
Prof. Manju Mukherjee, Kolkata
Dr S. Maitra, Kolkata.
Organising Committee
President: Dr. Subrata Ganguly
Vice President: Prof.D.J.Chattopadhyay
Convenor : Dr. K.Chakrabarti,
Head, Dept. of Biochemistry.
Treasurer : Prof. M.K. Poddar
Members:
Prof A Mondal,Biochem.Dept.
Prof. A. B.Banerjee, Biochem.Dept
Prof,C. K. Ghosh, Biochem.Dept
Prof.A.K.Bhattacharyya,Biochem.Dept
Prof S. K. Banerjee, Biochem.Dept
Prof. M.K. Poddar, Biochem.Dept
Dr. A. Dasgupta, Biochem.Dept
Dr.(Mrs)M.Bhattacharyya,Biochem.Dept.
Dr. (Mrs) M. Dasgupta, Biochem.Dept
Dr. P. K. Bag, Biochem.Dept
Dr. S. Ghosh, Biochem.Dept.


ABSTRACT OF PAPERS

Prof. T. Ramasarma
Honorary Distinguished Chair, Centre for DNA Fingerprinting & Diagnostics,
Hyderabad 500 076,
INSA Honorary Scientist, Solid State & Structural Chemistry Unit and
Department of Biochemistry, Indian Institute of Science, Bangalore 560 012.
At the University of Wisconsin (USA), Crane et al. discovered in 1957 a lipid-quinone in mitochondria and named it coenzyme Q. Delineation of its function in electron transport chain had opened its redox-based cellular role. At the Indian Institute of Science, Bangalore, we found in 1961that coenzyme Q is not confined to mitochondria and is distributed in liver cell fractions. Other functions became implicit. Indeed Mellors and Tappel found in 1966 its antioxidant function of protecting membranes. Is the cellular
function of coenzyme Q restricted to "redox only"? Morton and coworkers at the University of Liverpool (U.K.) independently
discovered the same compound, and named it ubiquinone. Helping in its isolation was the advantage of its enormous increase in the liver of animal deficient in vitamin A, later found by us to be due to decreased catabolism. The native molecule was absorbed through intestines into liver, and was degraded, but not when the side-chain double bonds were saturated. Quinone products with truncated side-chain were found to be excreted in urine of animals fed coenzyme Q by Gloor et al. at Hoffman-La Roche,
Switzerland (with Q9), and later Imada et al. in Japan (with Q7). Coenzyme Q is ubiquitous with varying length of the side-chain isoprene units (animals and plants, Q10; rats/mice and insects, Q9; yeasts, Q6/7; bacteria, Q8/9/10). No diet is free of coenzyme Q and its consumption is therefore inescapable in any form of food. Then how is it only Q10 is present in animals and humans? Are other forms not absorbed? Experimentally
Coenzyme Q, a vitamin?
homologues of Q10 - Q6 given orally were absorbed into liver, albeit in small amounts. These absorbed compounds must be degraded rapidly. Do these degraded products appear in blood and tissues transiently and exhibit other functions?
We made an observation in 1968 that blood pressure decreased in a hypertensive patient given Q10 30 mg daily for few days. Several reports appeared after from Japan and USA on this NO-like effect of fed lipid quinone. Indeed is used extensively for this purpose. Treatment of coenzyme Q with ozone yielded a degradation product having unmodified ring that retained its spectral characteristics and a truncated side-chain that made it water-soluble. This derivative, but not the intact lipid-quinone, showed relaxation of phenylephrine-contracted rat arterial rings. This effect offers an explanation for the known hypotensive action of exogenous coenzyme Q regardless of its side-chain length.

New Frontiers of research in jute and allied fibres
Dr. H.S. Sen
Director,
Central Research Institute for Jute & Allied Fibres
P.O. Barrackpore, Kolkata – 700 120, West Bengal
Prospects of jute and allied fibres have been a subject of fresh review in terms of various value added uses identified for each in the wake of deep inroads of polythene and polythene based products into the market. In the recent past fresh assessments have been made in several quarters involving researchers, planners and developmental agencies taking into consideration the nitty-gritty of the issues in terms of market potentiality of the fibre based products vis-à-vis synthetic products inside and outside the country. The
picture gradually emerging is that all these fibre crops should have still wider prospects in the future in view of these being eco-friendly and renewable. To achieve the fresh target in production which may have an accelerated growth in future days all stakeholders involved in the production of fibre, manufacture of fibre based products and those in the marketing sector have
to work in a systems approach mode. This should essentially involve developing a comprehensive jute policy in the first place by the government taking into consideration every aspect of the entire chain. CRIJAF has been involved over more than fifty years in looking into the research on productivity of fibres, which now has more than doubled as national average in jute since fifties. Progress has not been so spectacular in other allied fibres, although reasonable progress has been made for each including ramie, sisal, mesta and sunnhemp. Flax, being one of the highly demanding fine quality fibres, has been a neglected area so far and deserves
much more attention in future. Perhaps, production alone is no more the main issue. Alongwith this quality improvement has to be addressed with equal importance in view of various diversified uses coming into the market other than the traditional uses so far in jute in the form of hessian sacks and CBC. CRIJAF has considered various approaches to address the quality issues, in particular, and has already yielded results mainly through genetic manipulation. A significant achievement made in quality front through normal
hybridization programme is development of a line with optimal lignin content to stabilize at around 8-10% in contrast to 13-14% normally present in jute. This is already in advanced generation. A number of other important varieties with improved quality fibre has already been developed. Protocols for tissue culture in jute and sisal have already been established in this institute waiting for commercialization. There are various other means for genetic manipulation and CRIJAF, for that matter, is concentrating on wide
stock of germplasms available in its gene bank, particularly the wild species. Studies on identification of molecular markers of capsularis and olitorius jute were initiated. Standardization of DNA isolation protocol and PCR protocol for RAPD analysis were partially completed. Breeding for complex characters like drought, salt or flood tolerance or yield characteristics for crop improvement is difficult because these characters are controlled by more than one gene that is they are quantitative
traits. The improvement of quantitative traits has been an important goal for many plant breeding programs. The breeder would like to identify as early as possible those lines which contain QTL alleles that contribute to a high value of the trait under selection and assemble the QTLs having positive effects to develop a new variety with higher yield level. Exploitation of heterosis in jute is another area which will enable the breeder to boost the yield level further. In this backdrop, biotechnological approaches are
considered to pay rich dividends in future. The other issues to be addressed include developing varieties tolerant to biotic stress conditions, weed management by biological means, and microbial intervention for retting of jute, mesta and sunnhemp. Developing
transgenic resistant lines for jute, in particular, to combat biotic and abiotic stress is an important area receiving serious attention at CRIJAF. Following the examples in other crops like wheat, tobacco etc. source genes may be identified to be incorporated in jute to overcome the drought susceptibility. In a significant research achievement at CRIJAF growth enhancement of jute & mesta through inoculation of RNMV was observed. From a detailed field verification backed with detailed laboratory investigation the results
have shown than in energized jute plants RNMV has significantly improved pentose phosphate shunt, which in turn enhanced the metabolic pathway leading to vascular differentiation better than the normal ones. The hyperactive profiling of esterase enzyme in energized plant indicated a probable reflection of overcoming stress situation developed in plants due to lower fertilizer input by RNMV inoculation. In ramie, the gum content in raw fibre is 23% or above, which is the main detriment to quality fibre based production by textiles. The technology so far available for degumming is neither cost-effective nor user-friendly. The institute developed, in collaboration with the Biotechnology Department of Calcutta University, a cost effective, eco-and user-friendly technology using Bacillus strains and green papaya as pectinase source for degumming to reduce the gum content by about 16-17%. It is hoped that biotechnology in jute and allied fibres in combination with conventional approaches in breeding and other areas, a few of them as indicated above, will guide future research in pursuit for market-driven productivity package where allied fibres will play increasingly important role in future.


TB: The unmet Medical need & a fresh perspective for the Drug
Discovery Path.
Dr. Raman K Roy
AstraZeneca India Pvt. Ltd., Bangalore, India
The search for new antibacterials in general and for M.tb in particular, has been rather disappointing over decades. There have been no new drugs to treat tuberculosis in the last four decades. TB now infects one third of world population and causes close to 8 million new cases of active TB and 3 million deaths each year. HIV has had a devastating impact on the existing TB control programmes. Nine percent of all new TB cases in adults are now co-infected with HIV. The threat of MDR-TB was long recognised but the impact on the TB epidemic was not perceived until in recent time. The existing regime of drugs for the treatment of M.tb although efficacious in many ways, has obvious limitations in an effective TB control programme. The long duration of the therapy and the associated side effects and non-compliance, are the most important drawbacks of the current regime. Another limitation
of the current therapy is in the treatment of the latent form of the disease. The physiology of the TB organism in this state of its persistence in the human body is totally unknown. Although TB is known to be one of the oldest diseases inflicting the human population, the level of academic research in understanding the molecular and pathogenic aspect of the disease has been
rather limited, until in recent times. There is urgent need for new drugs to combat the present scenario of the TB
epidemic. This is a very challenging task and will demand our innovative thinking at many crucial steps of the drug discovery process. The process of TB drug discovery will be discussed in the context of the disease pattern and
our current knowledge of the physiology of the pathogen.


Unraveling Androgen Receptor Interactions by Proteomic Approach
Dr. Nishit K Mukhopadhyay
Department of Surgery, Brigham and Women’s Hospital, Harvard Medical
School, 221 Longwood Avenue, Boston, Massachusetts 02115 USA
The functional characterization of genes and their gene products is the main challenge of the genomic era. Transcriptional activation of a gene involves an orchestrated recruitment of multiple components of the basal transcription
machinery and intermediate factors. Androgen receptor (AR), a member of the nuclear receptor (NR) superfamily which plays a key role in proper development and function of male reproductive organs, activates transcription through association with androgen responsive elements (ARE) located within the promoter regions of target genes. As a steroid induced transcriptional regulator, AR needs to communicate with many co-activators and co-repressors for its activity. Examining the simultaneous interactions of
AR with multiple transcription factors in the network is a direct way to assemble the jigsaw puzzle of AR interacting proteins into a functional map. I will demonstrate a novel, high-througput, transcription factor-transcription factor (TF-TF) interaction array method to capture the AR interacting network of proteins in a single experiment using androgen responsive cells. Moreover, while steroid receptors act as ligand-induciable transcription factors regulating expression of target genes, their other biological functions
including activation of diverse signal transduction pathways are also emerging. Using this novel (TF-TF) array technology, we have recently identified multiple new partners of AR (). Identification and probable function of some of the new partners of AR will be discussed in the talk.

Mechanism of transcription termination and antitermination in E.coli.
Dr. Ranjan Sen, Anoop Cheeran, Bibhusita Pani, Jisha Chelesary, R.
Suganthan, G. Swapna and Irfan Bandey.
Laboratory of Transcription Biology
Center for DNA fingerprinting and Diagnostics
Hyderabad.
Transcription elongation complex comprising of RNA polymerase (RNAP), DNA template and nascent RNA is extremely stable and processive yet dynamic in nature. However this complex can be readily dissociated in response to specific signals called terminators. These signals comprise of run of Us followed by a hairpin in the nascent RNA in case of factor-independent terminators and for factor dependent terminators, a protein called rho is involved. RNA polymerase can overcome these termination signals if it is
modified by a class of factors called antiterminators. Most well-known antierminators are N and Q proteins and PUT RNA, all of which are from lambdoid phages. Several host factors such as NusA, NusG etc. are also involved in both these processes. Although the biochemical properties of terminators and antiterminators are worked out, the basic mechanism of these processes are still not clearly understood. Our laboratory is focused to understand these mechanisms. Our studies involve 1) probing of the interaction of antiterminator N with elongation complex using genetic and biochemical techniques, 2) probing the active site rearrangement of the elongation complex at the terminators and 3) understanding how rho can dissociate RNAP. We have recently isolated several RNAP mutants specifically defective to N dependent antitermination which are located in and around the active center. This indicates that N
exerts its effect through active site rearrangement. In a parallel study we have also probed the state of elongation complex stalled at terminator signals. I will present these results in the light of the model structure of ternary elongation complex

.
HIV-1 Tat Stimulates preinitiation Complex assembly through an
Alternative TBP Complex that Lacks TAFs
Dr. Tamal Raha
Umass Medical Center, HHMI,
Worcester, MA 01605, USA
Typical eukaryotic transcriptional activator proteins (activators) function by stimulating preinitiation complex (PIC) assembly and transcription initiation. By contrast, the human immunodeficiency virus type I (HIV-1) trans-activator protein Tat stimulates transcription of the HIV-1 long terminal repeat (LTR) but is thought to act by promoting transcription elongation. Here we study the mechanism of Tat action by analyzing transcription complex assembly in vivo using chromatin immunoprecipitation (ChIP)
assays. We find, unexpectedly, that like typical activators Tat dramatically stimulates PIC assembly. Most surprisingly, the PIC formed on the HIV-I LTR does not contain TFIID but rather an alternative TATA-box-binding protein (TBP) complex that lacks TBP-associated factors (TAFs). Tat activity is mediated through a direct interaction with the cellular cofactor, P-TEFb. Artificial tethering of Tat or P-TEFb subunits to HIV-1 promoter DNA or nascent RNA activates transcription by stimulating assembly of a PIC that
containsthe alternative TBP complex. Finally, we show that CIITA, a cellular activator that also uses P-TEFb as a cofactor, functions through this alternative TBP complex. Thus, transcription of protein-coding genes in mammalian cells involves multiple TBP complexes whose TAF compositions differ.